dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02446
Location and strand information: 6564 - 8645 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 7.0398
Protein molecular weight: 78128.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02447
Location and strand information: 8624 - 10384 (+)
Family: GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0131
Protein molecular weight: 65334.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02448
Location and strand information: 10455 - 11831 (+)
Family: 2.A.1.1.74
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02449
Location and strand information: 11815 - 13896 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7083
Protein molecular weight: 79770.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02450
Location and strand information: 13893 - 16535 (+)
Family: GH138
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.222
Protein molecular weight: 99722.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02451
Location and strand information: 16554 - 20597 (+)
Family: GH137|CBM57|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.814
Protein molecular weight: 153796.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02452
Location and strand information: 20921 - 23272 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.7373
Protein molecular weight: 89442.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02453
Location and strand information: 23423 - 24019 (+)
Family: null
Protein type: null
Protein description: Evolved beta-galactosidase subunit alpha

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02454
Location and strand information: 24030 - 26840 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.9413
Protein molecular weight: 105516.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02455
Location and strand information: 26840 - 31426 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8958
Protein molecular weight: 171380.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02456
Location and strand information: 31482 - 31622 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02457
Location and strand information: 32344 - 33909 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02458
Location and strand information: 34243 - 36366 (+)
Family: GH139
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1853
Protein molecular weight: 80518.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02459
Location and strand information: 36615 - 37787 (-)
Family: null
Protein type: null
Protein description: 1,3-propanediol dehydrogenase

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02460
Location and strand information: 37933 - 39165 (-)
Family: null
Protein type: null
Protein description: 1,4-dihydroxy-2-naphthoyl-CoA hydrolase

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02461
Location and strand information: 39538 - 42054 (+)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1395
Protein molecular weight: 93843.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02462
Location and strand information: 42557 - 42709 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02463
Location and strand information: 43091 - 45922 (-)
Family: 1.B.42.1.8
Protein type: TC
Protein description: LPS-assembly protein LptD

Gene clsuter ID: MGYG000002394_24|CGC1
Gene ID: MGYG000002394_02464
Location and strand information: 46156 - 48432 (-)
Family: 2.A.37.5.2
Protein type: TC
Protein description: Glutathione-regulated potassium-efflux system protein KefB

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002394_02446	GH127_e2\|3.2.1.-	carrageenan
MGYG000002394_02447	GH141_e0\|3.2.1.51	pectin
MGYG000002394_02449	GH78_e26\|3.2.1.40	alpha-rhamnoside
MGYG000002394_02450	GH138_e0\|3.2.1.-
MGYG000002394_02451	GH2_e49\|GH137_e0\|CBM57_e1\|3.2.1.31\|3.2.1.185	pectin\|beta-glucuronan
MGYG000002394_02452	GH2_e2\|3.2.1.23	beta-galactan
MGYG000002394_02454	GH2_e77\|3.2.1.-	pectin
MGYG000002394_02455	GH106_e13\|3.2.1.40	pectin
MGYG000002394_02458	GH139_e0\|3.2.1.-	pectin
MGYG000002394_02461	GH78_e41\|3.2.1.40	alpha-rhamnoside

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002394_02446	Non-reducing end beta-L-arabinofuranosidase	CAZyme	6564	8645	+	GH127
MGYG000002394_02447	hypothetical protein	CAZyme	8624	10384	+	GH141
MGYG000002394_02448	hypothetical protein	TC	10455	11831	+	2.A.1.1.74
MGYG000002394_02449	hypothetical protein	CAZyme	11815	13896	+	GH78
MGYG000002394_02450	hypothetical protein	CAZyme	13893	16535	+	GH138
MGYG000002394_02451	Beta-galactosidase	CAZyme	16554	20597	+	GH137\| CBM57\| GH2
MGYG000002394_02452	Beta-galactosidase	CAZyme	20921	23272	+	GH2
MGYG000002394_02453	Evolved beta-galactosidase subunit alpha	null	23423	24019	+	Bgal_small_N
MGYG000002394_02454	Beta-galactosidase	CAZyme	24030	26840	+	GH2
MGYG000002394_02455	hypothetical protein	CAZyme	26840	31426	+	GH106
MGYG000002394_02456	hypothetical protein	null	31482	31622	+	No domain
MGYG000002394_02457	hypothetical protein	null	32344	33909	+	AAA-ATPase_like\| PDDEXK_9
MGYG000002394_02458	hypothetical protein	CAZyme	34243	36366	+	GH139
MGYG000002394_02459	1,3-propanediol dehydrogenase	null	36615	37787	-	Fe-ADH
MGYG000002394_02460	1,4-dihydroxy-2-naphthoyl-CoA hydrolase	null	37933	39165	-	Hydrolase_3\| 4HBT
MGYG000002394_02461	hypothetical protein	CAZyme	39538	42054	+	CBM67\| GH78
MGYG000002394_02462	hypothetical protein	null	42557	42709	-	No domain
MGYG000002394_02463	LPS-assembly protein LptD	TC	43091	45922	-	1.B.42.1.8
MGYG000002394_02464	Glutathione-regulated potassium-efflux system protein KefB	TC	46156	48432	-	2.A.37.5.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature